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misc
calcoloscientifico:softwareapplicativonew1:misc
Name
Version
Installation
Module
note
All APPLICATIONS / TOOLS
Crystal14
1.04
/hpc/share
crystal14/1.0.4 (todo)
Matlab
R2011a
/hpc/share
matlab/R2011a
Matlab
R2017a
/hpc/share
matlab/R2017a (default)
FSDA
/hpc/share
toolkit di matlab/R2017a
http://www.riani.it/MATLAB/FSDA/index.html
Octave
3.8.2
rpm
no
https://www.gnu.org/software/octave/
R
3.3.3
module
gnu R_base/3.3.2
https://www.r-project.org/
QE
5.4.0
rpm
no
http://www.quantum-espresso.org/
Gromacs
4.5.7, 5.1.4
/hpc/share
no
http://www.gromacs.org/
Gaussian
09, 16
/hpc/share
http://gaussian.com/
Amber
11
/hpc/share
http://ambermd.org/
Schrodinger
2017
/hpc/share
Abaqus
2017, 2018
/hpc/share
https://en.wikipedia.org/wiki/Abaqus
Emboss
6.6.0
/hpc/share
http://emboss.sourgeforge.net
Itpp
4.4.1
/hpc/share
http://itpp.sourceforge.net
AutoDock
4.2.6
/hpc/share
fds
6.5.3
/hpc/share
https://github.com/firemodels/fds/wiki
sentaurus
2017.09
/hpc/share
sentaurus
Samtools
1.6
/hpc/share
http://www.htslib.org/
Star
2.5.3a
/hpc/share
https://github.com/alexdobin/STAR
Bedtools
2.25.0
/hpc/share
http://bedtools.readthedocs.io/en/latest/
Bowtie
1.2.2
/hpc/share
http://bowtie-bio.sourceforge.net/index.shtml
Bowtie2
2.3.3.1
/hpc/share
http://bowtie-bio.sourceforge.net/bowtie2/index.shtml
tensorflow-gpu
module
python/3.6.3 cuda gnu
https://www.tensorflow.org
keras
module
python/3.6.3 cuda gnu
https://keras.io/
qiime
virtualenv
http://qiime.org/
flash
module
prinseq
module
espresso md
virtualenv
http://espressomd.org/wordpress/
namd
module
http://www.ks.uiuc.edu/Research/namd/
plumed
module
http://www.plumed.org/
mpi4py
rpm ohpc
calcoloscientifico/softwareapplicativonew1/misc.txt
· Ultima modifica: 29/11/2018 12:49 da
fausto.pagani
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