^  Name  ^  Version  ^  Installation  ^  Module  ^ note ^
^  APPLICATIONS / TOOLS  ^^^^^
| Matlab     | R2011a   | /hpc/share   | matlab/R2011a  |
| Matlab     | R2017a   | /hpc/share   | matlab/R2017a (default)  |
| Octave    | 3.8.2   | rpm        | no    | https://www.gnu.org/software/octave/  |
| [[..:priv:cluster:softwareapplicativo:R]]       | 3.3.3   | module     | gnu R_base/3.3.2  | https://www.r-project.org/  |
| [[..:priv:cluster:softwareapplicativo:Samtools]] | 1.6 | /hpc/share | |http://www.htslib.org |
| [[..:priv:cluster:softwareapplicativo:Star]] | 2.5.3a | /hpc/share | |https://github.com/alexdobin/STAR |
| [[..:priv:cluster:softwareapplicativo:Bedtools]] | 2.25.0 | /hpc/share | | http://bedtools.readthedocs.io/en/latest |
| [[..:priv:cluster:softwareapplicativo:Bowtie]] | 1.2.2 | /hpc/share | | http://bowtie-bio.sourceforge.net/index.shtml |
| [[..:priv:cluster:softwareapplicativo:Bowtie2]] | 2.3.3.1 | /hpc/share | | http://bowtie-bio.sourceforge.net/bowtie2/index.shtml |
| [[..:priv:cluster:softwareapplicativo:qiime]] |  | virtualenv  | | http://qiime.org |
| [[..:priv:cluster:softwareapplicativo:flash]] |  | module | | |
| [[..:priv:cluster:softwareapplicativo:prinseq]] |  | module | |  |
| [[..:priv:cluster:softwareapplicativo:espresso md]] |  | virtualenv | | http://espressomd.org/wordpress |
| [[..:priv:cluster:softwareapplicativo:mpi4py]] |  | rpm ohpc  | | |
| [[..:priv:cluster:softwareapplicativo:relion]] | 3.0.8 | module | | https://www3.mrc-lmb.cam.ac.uk/relion |
| [[..:priv:cluster:softwareapplicativo:relion]] | 3.1.1 | module | | https://www3.mrc-lmb.cam.ac.uk/relion |