| Entrambe le parti precedenti la revisioneRevisione precedenteProssima revisione | Revisione precedente |
| calcoloscientifico:softwareapplicativonew1:phisics [29/11/2018 11:39] – fausto.pagani | calcoloscientifico:softwareapplicativonew1:phisics [29/11/2018 11:58] (versione attuale) – fausto.pagani |
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| | Matlab | R2017a | /hpc/share | matlab/R2017a (default) | | | Matlab | R2017a | /hpc/share | matlab/R2017a (default) | |
| | Octave | 3.8.2 | rpm | no | https://www.gnu.org/software/octave/ | | | Octave | 3.8.2 | rpm | no | https://www.gnu.org/software/octave/ | |
| | [[.:priv:cluster:softwareapplicativo:R]] | 3.3.3 | module | gnu R_base/3.3.2 | https://www.r-project.org/ | | | [[..:priv:cluster:softwareapplicativo:R]] | 3.3.3 | module | gnu R_base/3.3.2 | https://www.r-project.org/ | |
| | [[..:priv:cluster:softwareapplicativo:QE]] | 5.4.0 | rpm | no | http://www.quantum-espresso.org/ | | | [[..:priv:cluster:softwareapplicativo:QE]] | 5.4.0 | rpm | no | http://www.quantum-espresso.org/ | |
| | [[..:priv:cluster:softwareapplicativo:Gromacs ]] | 4.5.7, 5.1.4 | /hpc/share | no | http://www.gromacs.org/ | | | [[..:priv:cluster:softwareapplicativo:Gromacs ]] | 4.5.7, 5.1.4 | /hpc/share | no | http://www.gromacs.org/ | |
| | [[..:priv:cluster:softwareapplicativo:Amber ]] | 11 | /hpc/share | | http://ambermd.org/ | | | [[..:priv:cluster:softwareapplicativo:Amber ]] | 11 | /hpc/share | | http://ambermd.org/ | |
| | [[.:priv:cluster:softwareapplicativo:AutoDock ]] | 4.2.6 | /hpc/share | | | | [[..:priv:cluster:softwareapplicativo:AutoDock ]] | 4.2.6 | /hpc/share | | |
| | [[.:priv:cluster:softwareapplicativo: Samtools]] | 1.6 | /hpc/share | |http://www.htslib.org/ | | | [[..:priv:cluster:softwareapplicativo: espresso md ]] | | virtualenv | | http://espressomd.org/wordpress/| |
| | [[.:priv:cluster:softwareapplicativo: Star]] | 2.5.3a | /hpc/share | |https://github.com/alexdobin/STAR | | | [[..:priv:cluster:softwareapplicativo: plumed ]] | | module | | http://www.plumed.org/| |
| | [[.:priv:cluster:softwareapplicativo: Bedtools ]] | 2.25.0 | /hpc/share | | http://bedtools.readthedocs.io/en/latest/ | | | [[..:priv:cluster:softwareapplicativo: mpi4py ]] | | rpm ohpc | | | |
| | [[.:priv:cluster:softwareapplicativo: Bowtie ]] | 1.2.2 | /hpc/share | | http://bowtie-bio.sourceforge.net/index.shtml | | |
| | [[.:priv:cluster:softwareapplicativo: Bowtie2 ]] | 2.3.3.1 | /hpc/share | | http://bowtie-bio.sourceforge.net/bowtie2/index.shtml | | |
| | [[.:priv:cluster:softwareapplicativo: tensorflow-gpu ]] | | module | python/3.6.3 cuda gnu | https://www.tensorflow.org | | |
| | [[.:priv:cluster:softwareapplicativo: keras ]] | | module |python/3.6.3 cuda gnu| https://keras.io/ | | |
| | [[.:priv:cluster:softwareapplicativo: qiime ]] | | virtualenv | | http://qiime.org/ | | |
| | [[.:priv:cluster:softwareapplicativo: flash ]] | | module | | | | |
| | [[.:priv:cluster:softwareapplicativo: prinseq ]] | | module | | | | |
| | [[.:priv:cluster:softwareapplicativo: espresso md ]] | | virtualenv | | http://espressomd.org/wordpress/| | |
| | [[.:priv:cluster:softwareapplicativo: namd ]] | | module | | http://www.ks.uiuc.edu/Research/namd/| | |
| | [[.:priv:cluster:softwareapplicativo: plumed ]] | | module | | http://www.plumed.org/| | |
| | [[.:priv:cluster:softwareapplicativo: mpi4py ]] | | rpm ohpc | | | | |
