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calcoloscientifico:cluster:softwareapplicativo:orca

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calcoloscientifico:cluster:softwareapplicativo:orca [13/09/2019 13:36] – creata fausto.paganicalcoloscientifico:cluster:softwareapplicativo:orca [11/01/2026 23:14] (versione attuale) fabio.spataro
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   * Licenza: End User License Agreement (EULA) for the ORCA software   * Licenza: End User License Agreement (EULA) for the ORCA software
   * Richiesto da: prof.ssa Anna Painelli   * Richiesto da: prof.ssa Anna Painelli
-  * Data richiesta:  +  * Data richiesta: 31/10/2018 
-  * Usato da: prof.ssa Anna Painelli+  * Usato da: G_MMM (prof.ssa Anna Painelli
 + 
 +Several versions of ORCA are available: 
 + 
 +^ ORCA   ^ 
 +| 4.2.1  | 
 +| 5.0.3  | 
 +| 6.0.1  | 
 +| 6.1.1  | 
 + 
 +Compilation details: 
 + 
 +^ ORCA   ^ Compiler   ^ MPI            ^ 
 +| 4.2.1  | GNU 7.3.0  | OpenMPI 3.1.4  | 
 +| 5.0.3  | GNU 8.3.0  | OpenMPI 4.1.1  | 
 +| 6.0.1  | GNU 8.3.0  | OpenMPI 4.1.6  | 
 +| 6.1.1  | GNU 8.3.0  | OpenMPI 4.1.8  | 
 + 
 +For example ORCA 4.2.1 was compiled with the GNU 7.3.0 tool chain and OpenMPI 3.1.4. 
 + 
 +Environment modules: 
 + 
 +^ ORCA   ^ Prerequisites               ^ Module 
 +| 4.2.1  | gnu7/7.3.0 openmpi3/3.1.4   | 4.2.1   | 
 +| 5.0.3  | gnu8/8.3.0  openmpi4/4.1.1  | 5.0.3   | 
 +| 6.0.1  | gnu8/8.3.0  openmpi4/4.1.6  | 6.0.1   | 
 +| 6.1.1  | gnu8/8.3.0  openmpi4/4.1.8  | 6.1.1   |
  
 === ORCA serial job === === ORCA serial job ===
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 Script ''slurm-orca-vrt.sh'': Script ''slurm-orca-vrt.sh'':
  
-<code bash>+<code bash slurm-orca-vrt.sh>
 #!/bin/bash #!/bin/bash
 #SBATCH --job-name=orca #SBATCH --job-name=orca
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 #SBATCH --time=0-01:00:00 #SBATCH --time=0-01:00:00
 #SBATCH --partition=vrt #SBATCH --partition=vrt
-#SBATCH --account=<accountname>+#SBATCH --qos=vrt 
 +#SBATCH --account=<account>
  
 test -n "$SLURM_JOB_NAME" || exit test -n "$SLURM_JOB_NAME" || exit
  
 module load gnu7/7.3.0 module load gnu7/7.3.0
-module load orca/4.1.1+module load openmpi3/3.1.4 
 +module load orca/4.2.1
  
    JOB_NAME="$SLURM_JOB_NAME"    JOB_NAME="$SLURM_JOB_NAME"
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 Input file ''inputfile.inp'': Input file ''inputfile.inp'':
  
-<code>+<code text inputfile.inp>
 ! B3LYP def2-SVP Opt ! B3LYP def2-SVP Opt
 # My first ORCA calculation # My first ORCA calculation
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 == Execution of a ORCA parallel program == == Execution of a ORCA parallel program ==
  
-Script ''slurm-orca-bdw.sh'':+Script ''slurm-orca-cpu.sh'':
  
-<code bash>+<code bash slurm-orca-cpu.sh>
 #!/bin/bash #!/bin/bash
 #SBATCH --job-name=orca #SBATCH --job-name=orca
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 #SBATCH --mem=16G #SBATCH --mem=16G
 #SBATCH --time=0-01:00:00 #SBATCH --time=0-01:00:00
-#SBATCH --partition=bdw +#SBATCH --partition=cpu 
-#SBATCH --account=<accountname>+#SBATCH --qos=cpu 
 +#SBATCH --account=<account>
  
 test -n "$SLURM_JOB_NAME" || exit test -n "$SLURM_JOB_NAME" || exit
  
 module load gnu7/7.3.0 module load gnu7/7.3.0
-module load openmpi3/3.1.3 +module load openmpi3/3.1.4 
-module load orca/4.1.1+module load orca/4.2.1
  
    JOB_NAME="$SLURM_JOB_NAME"    JOB_NAME="$SLURM_JOB_NAME"
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 Input file ''par-inp.inp'': Input file ''par-inp.inp'':
  
-<code>+<code text par-inp.inp>
 ! B3LYP def2-SVP  Opt PAL4 ! B3LYP def2-SVP  Opt PAL4
 # My first ORCA calculation # My first ORCA calculation
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 </code> </code>
  
-Submitting ''slurm-orca-bdw.sh'':+Submitting ''slurm-orca-cpu.sh'':
  
 <code> <code>
-sbatch slurm-orca-bdw.sh+sbatch slurm-orca-cpu.sh
 </code> </code>
 +
 +[[https://sites.google.com/site/orcainputlibrary/setting-up-orca|Setting up ORCA]]
calcoloscientifico/cluster/softwareapplicativo/orca.1568374565.txt.gz · Ultima modifica: da fausto.pagani

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