calcoloscientifico:cluster:softwareapplicativo:orca
Differenze
Queste sono le differenze tra la revisione selezionata e la versione attuale della pagina.
| Prossima revisione | Revisione precedente | ||
| calcoloscientifico:cluster:softwareapplicativo:orca [13/09/2019 13:36] – creata fausto.pagani | calcoloscientifico:cluster:softwareapplicativo:orca [31/01/2023 09:50] (versione attuale) – federico.prost | ||
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| Linea 3: | Linea 3: | ||
| * Home page: [[https:// | * Home page: [[https:// | ||
| * Licenza: End User License Agreement (EULA) for the ORCA software | * Licenza: End User License Agreement (EULA) for the ORCA software | ||
| + | * {{ : | ||
| * Richiesto da: prof.ssa Anna Painelli | * Richiesto da: prof.ssa Anna Painelli | ||
| * Data richiesta: | * Data richiesta: | ||
| * Usato da: prof.ssa Anna Painelli | * Usato da: prof.ssa Anna Painelli | ||
| + | |||
| + | Several versions of ORCA are available: | ||
| + | |||
| + | ^ ORCA ^ | ||
| + | | 4.1.1 | | ||
| + | | 4.2.1 | | ||
| + | | 5.0.3 | | ||
| + | |||
| + | Compilation details: | ||
| + | |||
| + | ^ ORCA ^ Compiler | ||
| + | | 4.1.1 | GNU 7.3.0 | OpenMPI 3.1.3 | | ||
| + | | 4.2.1 | GNU 7.3.0 | OpenMPI 3.1.4 | | ||
| + | | 5.0.3 | GNU 8.3.0 | OpenMPI 4.1.1 | | ||
| + | |||
| + | For example ORCA 4.2.1 was compiled with the GNU 7.3.0 tool chain and OpenMPI 3.1.4. | ||
| + | |||
| + | Environment modules: | ||
| + | |||
| + | ^ ORCA ^ Prerequisites | ||
| + | | 4.1.1 | gnu7/7.3.0 openmpi3/ | ||
| + | | 4.2.1 | gnu7/7.3.0 openmpi3/ | ||
| + | | 5.0.3 | gnu8/ | ||
| === ORCA serial job === | === ORCA serial job === | ||
| Linea 13: | Linea 37: | ||
| Script '' | Script '' | ||
| - | <code bash> | + | <code bash slurm-orca-vrt.sh> |
| #!/bin/bash | #!/bin/bash | ||
| #SBATCH --job-name=orca | #SBATCH --job-name=orca | ||
| Linea 23: | Linea 47: | ||
| #SBATCH --time=0-01: | #SBATCH --time=0-01: | ||
| #SBATCH --partition=vrt | #SBATCH --partition=vrt | ||
| - | #SBATCH --account=< | + | #SBATCH --qos=vrt |
| + | #SBATCH --account=< | ||
| test -n " | test -n " | ||
| module load gnu7/7.3.0 | module load gnu7/7.3.0 | ||
| - | module load orca/4.1.1 | + | module load openmpi3/ |
| + | module load orca/4.2.1 | ||
| | | ||
| Linea 45: | Linea 71: | ||
| Input file '' | Input file '' | ||
| - | < | + | < |
| ! B3LYP def2-SVP Opt | ! B3LYP def2-SVP Opt | ||
| # My first ORCA calculation | # My first ORCA calculation | ||
| Linea 65: | Linea 91: | ||
| == Execution of a ORCA parallel program == | == Execution of a ORCA parallel program == | ||
| - | Script '' | + | Script '' |
| - | <code bash> | + | <code bash slurm-orca-cpu.sh> |
| #!/bin/bash | #!/bin/bash | ||
| #SBATCH --job-name=orca | #SBATCH --job-name=orca | ||
| Linea 76: | Linea 102: | ||
| #SBATCH --mem=16G | #SBATCH --mem=16G | ||
| #SBATCH --time=0-01: | #SBATCH --time=0-01: | ||
| - | #SBATCH --partition=bdw | + | #SBATCH --partition=cpu |
| - | #SBATCH --account=< | + | #SBATCH --qos=cpu |
| + | #SBATCH --account=< | ||
| test -n " | test -n " | ||
| module load gnu7/7.3.0 | module load gnu7/7.3.0 | ||
| - | module load openmpi3/ | + | module load openmpi3/ |
| - | module load orca/4.1.1 | + | module load orca/4.2.1 |
| | | ||
| Linea 100: | Linea 127: | ||
| Input file '' | Input file '' | ||
| - | < | + | < |
| ! B3LYP def2-SVP | ! B3LYP def2-SVP | ||
| # My first ORCA calculation | # My first ORCA calculation | ||
| Linea 110: | Linea 137: | ||
| </ | </ | ||
| - | Submitting '' | + | Submitting '' |
| < | < | ||
| - | sbatch slurm-orca-bdw.sh | + | sbatch slurm-orca-cpu.sh |
| </ | </ | ||
| + | |||
| + | [[https:// | ||
calcoloscientifico/cluster/softwareapplicativo/orca.1568374565.txt.gz · Ultima modifica: da fausto.pagani
