calcoloscientifico:cluster:softwareapplicativo:orca
Differenze
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Prossima revisione | Revisione precedente | ||
calcoloscientifico:cluster:softwareapplicativo:orca [13/09/2019 13:36] – creata fausto.pagani | calcoloscientifico:cluster:softwareapplicativo:orca [31/01/2023 09:50] (versione attuale) – federico.prost | ||
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* Home page: [[https:// | * Home page: [[https:// | ||
* Licenza: End User License Agreement (EULA) for the ORCA software | * Licenza: End User License Agreement (EULA) for the ORCA software | ||
+ | * {{ : | ||
* Richiesto da: prof.ssa Anna Painelli | * Richiesto da: prof.ssa Anna Painelli | ||
* Data richiesta: | * Data richiesta: | ||
* Usato da: prof.ssa Anna Painelli | * Usato da: prof.ssa Anna Painelli | ||
+ | |||
+ | Several versions of ORCA are available: | ||
+ | |||
+ | ^ ORCA ^ | ||
+ | | 4.1.1 | | ||
+ | | 4.2.1 | | ||
+ | | 5.0.3 | | ||
+ | |||
+ | Compilation details: | ||
+ | |||
+ | ^ ORCA ^ Compiler | ||
+ | | 4.1.1 | GNU 7.3.0 | OpenMPI 3.1.3 | | ||
+ | | 4.2.1 | GNU 7.3.0 | OpenMPI 3.1.4 | | ||
+ | | 5.0.3 | GNU 8.3.0 | OpenMPI 4.1.1 | | ||
+ | |||
+ | For example ORCA 4.2.1 was compiled with the GNU 7.3.0 tool chain and OpenMPI 3.1.4. | ||
+ | |||
+ | Environment modules: | ||
+ | |||
+ | ^ ORCA ^ Prerequisites | ||
+ | | 4.1.1 | gnu7/7.3.0 openmpi3/ | ||
+ | | 4.2.1 | gnu7/7.3.0 openmpi3/ | ||
+ | | 5.0.3 | gnu8/ | ||
=== ORCA serial job === | === ORCA serial job === | ||
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Script '' | Script '' | ||
- | <code bash> | + | <code bash slurm-orca-vrt.sh> |
#!/bin/bash | #!/bin/bash | ||
#SBATCH --job-name=orca | #SBATCH --job-name=orca | ||
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#SBATCH --time=0-01: | #SBATCH --time=0-01: | ||
#SBATCH --partition=vrt | #SBATCH --partition=vrt | ||
- | #SBATCH --account=< | + | #SBATCH --qos=vrt |
+ | #SBATCH --account=< | ||
test -n " | test -n " | ||
module load gnu7/7.3.0 | module load gnu7/7.3.0 | ||
- | module load orca/4.1.1 | + | module load openmpi3/ |
+ | module load orca/4.2.1 | ||
| | ||
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Input file '' | Input file '' | ||
- | < | + | < |
! B3LYP def2-SVP Opt | ! B3LYP def2-SVP Opt | ||
# My first ORCA calculation | # My first ORCA calculation | ||
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== Execution of a ORCA parallel program == | == Execution of a ORCA parallel program == | ||
- | Script '' | + | Script '' |
- | <code bash> | + | <code bash slurm-orca-cpu.sh> |
#!/bin/bash | #!/bin/bash | ||
#SBATCH --job-name=orca | #SBATCH --job-name=orca | ||
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#SBATCH --mem=16G | #SBATCH --mem=16G | ||
#SBATCH --time=0-01: | #SBATCH --time=0-01: | ||
- | #SBATCH --partition=bdw | + | #SBATCH --partition=cpu |
- | #SBATCH --account=< | + | #SBATCH --qos=cpu |
+ | #SBATCH --account=< | ||
test -n " | test -n " | ||
module load gnu7/7.3.0 | module load gnu7/7.3.0 | ||
- | module load openmpi3/ | + | module load openmpi3/ |
- | module load orca/4.1.1 | + | module load orca/4.2.1 |
| | ||
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Input file '' | Input file '' | ||
- | < | + | < |
! B3LYP def2-SVP | ! B3LYP def2-SVP | ||
# My first ORCA calculation | # My first ORCA calculation | ||
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</ | </ | ||
- | Submitting '' | + | Submitting '' |
< | < | ||
- | sbatch slurm-orca-bdw.sh | + | sbatch slurm-orca-cpu.sh |
</ | </ | ||
+ | |||
+ | [[https:// |
calcoloscientifico/cluster/softwareapplicativo/orca.1568374565.txt.gz · Ultima modifica: 13/09/2019 13:36 da fausto.pagani